Best Alignments for T0492

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	2.3331e-10	2h3jA/T0492-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	4.2350e-10	2gcxA/T0492-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	9.0196e-04	1qw1A/T0492-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	4.4658e-03	1fx7A/T0492-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtrA	5.5327e-03	2dtrA/T0492-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	3.8082e-02	2qq9A/T0492-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	1.3599e+01	1rhsA/T0492-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1j48A	1.6476e+01	1j48A/T0492-1j48A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.7.1
1y8xB	1.6594e+01	1y8xB/T0492-1y8xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhs	1.7468e+01	1rhs/T0492-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uarA	2.2536e+01	1uarA/T0492-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1ri5A	2.4932e+01	1ri5A/T0492-1ri5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.34
1vekA	3.1439e+01	1vekA/T0492-1vekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.5.2.1
1h75A	3.7893e+01	1h75A/T0492-1h75A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1e0cA	3.8133e+01	1e0cA/T0492-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1cbfA	4.3418e+01	1cbfA/T0492-1cbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1z3eB	4.9436e+01	1z3eB/T0492-1z3eB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.3.1
2fa1A	5.2111e+01	2fa1A/T0492-2fa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2c81A	5.9028e+01	2c81A/T0492-2c81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ve2A	5.9917e+01	1ve2A/T0492-1ve2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001