PFRMAT SS
TARGET T0489
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0489.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 154
METHOD
MODEL 1
M C 0.995
M C 0.587
F C 0.496
K C 0.372
W H 0.411
P H 0.483
W H 0.510
K H 0.556
A H 0.503
D H 0.459
D T 0.264
E T 0.332
S C 0.417
G C 0.840
N C 0.948
A H 0.763
E H 0.858
M H 0.923
P H 0.972
W H 0.968
E H 0.979
Q H 0.976
A H 0.951
L H 0.760
A H 0.666
I C 0.440
P C 0.297
V G 0.354
L G 0.720
A G 0.567
H G 0.408
L C 0.793
S C 0.970
S H 0.932
T H 0.952
E H 0.960
Q H 0.991
H H 0.981
K H 0.975
L H 0.985
T H 0.992
Q H 0.995
M H 0.995
A H 0.996
A H 0.994
R H 0.988
F H 0.979
L H 0.951
Q H 0.797
Q H 0.576
K H 0.314
R C 0.273
L E 0.512
V E 0.642
A E 0.495
L C 0.378
Q T 0.532
G T 0.463
L C 0.471
E C 0.536
L C 0.647
T C 0.928
P H 0.937
L H 0.973
H H 0.987
Q H 0.995
A H 0.995
R H 0.997
I H 0.998
A H 0.998
M H 0.996
L H 0.991
F H 0.970
C H 0.977
L H 0.970
P H 0.933
V H 0.812
L H 0.719
E H 0.453
L S 0.269
G C 0.260
I G 0.596
E G 0.522
W G 0.391
L C 0.387
D T 0.571
G T 0.710
F C 0.597
H E 0.467
E E 0.908
V E 0.971
L E 0.978
I E 0.931
Y E 0.616
P C 0.354
A S 0.343
P S 0.228
F E 0.289
I E 0.438
V E 0.471
D C 0.372
D E 0.325
E E 0.491
W E 0.541
E E 0.496
D C 0.433
D T 0.429
I T 0.529
G E 0.326
L E 0.635
V E 0.740
H E 0.512
N E 0.272
Q T 0.258
R E 0.353
V E 0.535
V E 0.614
Q E 0.614
S E 0.517
G E 0.395
Q E 0.354
S C 0.354
W T 0.213
Q T 0.278
Q S 0.256
G C 0.472
P C 0.482
V E 0.814
V E 0.850
L E 0.664
N C 0.495
W H 0.897
L H 0.935
D H 0.876
I H 0.938
Q H 0.873
D T 0.494
S T 0.543
F C 0.743
D C 0.518
A T 0.528
S T 0.445
G C 0.340
F C 0.472
N C 0.396
L E 0.408
V H 0.701
V H 0.886
H H 0.937
E H 0.942
V H 0.948
A H 0.969
H H 0.972
K H 0.972
L H 0.951
D H 0.922
T H 0.787
R T 0.446
N T 0.808
G S 0.370
D C 0.560
R C 0.417
A T 0.572
S S 0.377
G C 0.555
V C 0.643
P C 0.551
L C 0.501
I C 0.428
P C 0.294
L T 0.278
R C 0.395
E C 0.524
V H 0.806
A H 0.919
G H 0.939
W H 0.971
E H 0.979
H H 0.953
D H 0.928
L H 0.938
H H 0.948
A H 0.955
A H 0.957
M H 0.965
N H 0.942
N H 0.926
I H 0.930
Q H 0.935
D H 0.923
E H 0.917
I H 0.898
D H 0.862
L H 0.763
V H 0.557
G T 0.543
E C 0.379
S C 0.422
A C 0.349
A C 0.354
S C 0.474
I C 0.360
D C 0.543
A H 0.540
Y H 0.467
A H 0.381
A T 0.326
T S 0.267
D C 0.590
P H 0.911
A H 0.945
E H 0.957
C H 0.983
F H 0.983
A H 0.979
V H 0.980
L H 0.966
S H 0.951
E H 0.947
Y H 0.892
F H 0.764
F H 0.601
S H 0.376
A C 0.376
P H 0.680
E H 0.792
L H 0.672
F H 0.713
A H 0.697
P H 0.603
R H 0.690
F H 0.455
P H 0.938
A H 0.967
L H 0.983
W H 0.995
Q H 0.995
R H 0.994
F H 0.994
C H 0.987
H H 0.981
F H 0.968
Y H 0.927
R H 0.733
Q H 0.646
D C 0.748
P H 0.874
L H 0.888
A H 0.871
R H 0.915
R H 0.829
R H 0.687
E H 0.638
N H 0.483
G H 0.400
L H 0.333
Q C 0.254
D C 0.566
E T 0.671
G T 0.746
D C 0.423
R E 0.546
R E 0.792
I E 0.768
V E 0.551
H C 0.998
END