Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1yqyA	4.5125e-01	1yqyA/T0489-1yqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.14 d.166.1.1
1j7nA	9.0593e-01	1j7nA/T0489-1j7nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.14 d.92.1.14 d.166.1.1
1qkmA	1.8013e+01	1qkmA/T0489-1qkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ymtA	2.1121e+01	1ymtA/T0489-1ymtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1db1A	2.2860e+01	1db1A/T0489-1db1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2bptA	2.3069e+01	2bptA/T0489-2bptA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ie9A	2.3717e+01	1ie9A/T0489-1ie9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p54A	2.5688e+01	2p54A/T0489-2p54A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1prgA	2.7097e+01	1prgA/T0489-1prgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2btdA	2.9376e+01	2btdA/T0489-2btdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jadA	2.9914e+01	1jadA/T0489-1jadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pzlA	3.0383e+01	1pzlA/T0489-1pzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hg4A	3.0528e+01	1hg4A/T0489-1hg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y93A	3.4427e+01	1y93A/T0489-1y93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.11
2qniA	3.4954e+01	2qniA/T0489-2qniA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2prgA	3.5288e+01	2prgA/T0489-2prgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2ax9A	3.6131e+01	2ax9A/T0489-2ax9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2hi4A	3.6595e+01	2hi4A/T0489-2hi4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2lbd	3.7217e+01	2lbd/T0489-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sr7A	3.7612e+01	1sr7A/T0489-1sr7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001