# List of top-scoring protein chains for T0489.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.06667	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.09464	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
1pwuA	776	0.6737	d.92.1.14,d.92.1.14,d.166.1.1	95244,95245,95246
2q88A	257	20.81		
2vccA	891	22.78		
2jg0A	535	32.60		
2ob9A	130	38.25		
1ylqA	96	51.93	d.218.1.5	123671
1gwyA	175	58.74	b.97.1.1	83356
1zkoA	136	62.61		
2oqcA	327	73.30		
1tzqA	175	73.42	b.97.1.1	107522
2oayA	390	74.02		
1iazA	179	74.25	b.97.1.1	62131
1kd6A	179	74.42	b.97.1.1	68459
1hk5A	585	77.44	a.126.1.1,a.126.1.1,a.126.1.1	83536,83537,83538
1tf0A	572	77.64	a.126.1.1,a.126.1.1,a.126.1.1	106822,106823,106824
2vdbA	579	77.95		
1hk3A	585	78.25	a.126.1.1,a.126.1.1,a.126.1.1	83530,83531,83532
2bxkA	585	78.34	a.126.1.1,a.126.1.1	129431,129432
2esgC	585	78.53	a.126.1.1,a.126.1.1	132323,132324
1bkeA	581	78.54	a.126.1.1,a.126.1.1,a.126.1.1	19387,19388,19389
1rm8A	169	80.94	d.92.1.11	97660
1hv5A	165	83.64	d.92.1.11	61288
1a28A	256	89.06	a.123.1.1	19290