# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.07958	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.1760	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
1otjA	283	22.90	b.82.2.5	93517
1satA	471	26.06	b.80.7.1,d.92.1.6	28014,40300
2q22A	139	32.20		
1xo0A	324	39.22	a.60.9.1,d.163.1.1	115674,115675
1r1hA	696	42.81	d.92.1.4	104756
2a0uA	383	49.59		
1q7eA	428	51.20	c.123.1.1	96035
1jayA	212	53.65	c.2.1.6	66478
1t07A	94	56.54	d.279.1.1	106196
1j0mA	752	57.48	a.102.3.2,b.24.1.1,b.30.5.2	83910,83911,83912
2qniA	219	67.70		
1i1iP	681	75.32	d.92.1.5	40297
2pl5A	366	78.33		
1pt7A	437	79.10	c.123.1.1	95093
2cmuA	342	80.58		
1ru4A	400	84.52	b.80.1.9	97836
1bqbA	301	86.83	d.92.1.2	58962