# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.1366	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.2892	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
1otjA	283	24.06	b.82.2.5	93517
2q22A	139	28.87		
1xo0A	324	34.15	a.60.9.1,d.163.1.1	115674,115675
1i1iP	681	41.15	d.92.1.5	40297
1satA	471	46.55	b.80.7.1,d.92.1.6	28014,40300
2e62A	61	48.57		
1t07A	94	49.31	d.279.1.1	106196
1gwyA	175	52.62	b.97.1.1	83356
2qniA	219	54.46		
2oocA	113	54.97		
1bqbA	301	60.08	d.92.1.2	58962
1iazA	179	60.21	b.97.1.1	62131
1nu5A	370	64.09	c.1.11.2,d.54.1.1	92183,92184
1jayA	212	65.59	c.2.1.6	66478
1jndA	420	71.56	c.1.8.5,d.26.3.1	71757,71758
1oaaA	259	74.44	c.2.1.2	29829
2a0uA	383	76.35		
1rdqE	350	77.08	d.144.1.7	97314
2os5A	119	78.99		
2o5cA	659	80.18		
1r1hA	696	80.90	d.92.1.4	104756
1e9lA	377	81.23	c.1.8.5,d.26.3.1	59395,59396
1kd6A	179	81.64	b.97.1.1	68459
1vf8A	377	85.18	c.1.8.5,d.26.3.1	120029,120030
2d51A	406	86.04