# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.1724	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.3714	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
1xo0A	324	31.52	a.60.9.1,d.163.1.1	115674,115675
1otjA	283	34.98	b.82.2.5	93517
2q22A	139	37.69		
1t07A	94	43.46	d.279.1.1	106196
1i1iP	681	52.34	d.92.1.5	40297
2oocA	113	52.36		
2e62A	61	53.02		
1gwyA	175	56.70	b.97.1.1	83356
1nu5A	370	57.93	c.1.11.2,d.54.1.1	92183,92184
2cbyA	208	59.10	c.14.1.1	130202
1satA	471	66.13	b.80.7.1,d.92.1.6	28014,40300
2os5A	119	66.58		
1iazA	179	68.08	b.97.1.1	62131
1rdqE	350	73.41	d.144.1.7	97314
1uu3A	310	79.25	d.144.1.7	99999
1bqbA	301	81.22	d.92.1.2	58962
2qniA	219	81.68		
1sxjC	340	86.22	a.80.1.1,c.37.1.20	106085,106086
1kd6A	179	87.80	b.97.1.1	68459