# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.3328	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.5594	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
1otjA	283	25.23	b.82.2.5	93517
2q22A	139	27.60		
1qreA	247	39.17	b.81.1.5	28066
1xo0A	324	41.25	a.60.9.1,d.163.1.1	115674,115675
2o5cA	659	52.61		
1t07A	94	55.98	d.279.1.1	106196
2cbyA	208	56.20	c.14.1.1	130202
1vf8A	377	63.03	c.1.8.5,d.26.3.1	120029,120030
1uxyA	340	66.77	d.145.1.2,d.146.1.1	41748,41761
1iazA	179	67.88	b.97.1.1	62131
1gwyA	175	70.12	b.97.1.1	83356
1jayA	212	70.58	c.2.1.6	66478
2dg7A	195	71.04		
2qniA	219	72.31		
1d2kA	392	73.55	c.1.8.5,d.26.3.1	29008,38442
2os5A	119	76.39		
1uu3A	310	80.89	d.144.1.7	99999
2ebnA	289	80.90	c.1.8.5	28990
1i1iP	681	85.80	d.92.1.5	40297
1iab	200	89.41