# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.03675	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.06615	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
2cbyA	208	21.81	c.14.1.1	130202
1otjA	283	25.92	b.82.2.5	93517
2q22A	139	31.04		
1m7xA	617	34.16	b.1.18.2,b.71.1.1,c.1.8.1	78749,78750,78751
1j0mA	752	45.09	a.102.3.2,b.24.1.1,b.30.5.2	83910,83911,83912
1satA	471	57.25	b.80.7.1,d.92.1.6	28014,40300
1gwyA	175	57.59	b.97.1.1	83356
1iazA	179	63.63	b.97.1.1	62131
1bqbA	301	66.51	d.92.1.2	58962
1jayA	212	69.96	c.2.1.6	66478
1i1iP	681	70.90	d.92.1.5	40297
1t07A	94	72.70	d.279.1.1	106196
2e62A	61	73.30		
1r1hA	696	85.07	d.92.1.4	104756
2qniA	219	89.21		
2oocA	113	89.72