# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.1399	d.92.1.14,d.166.1.1	123903,123904
1j7nA	776	0.2181	d.92.1.14,d.92.1.14,d.166.1.1	66409,66410,66411
2q22A	139	31.47		
1otjA	283	36.01	b.82.2.5	93517
1xo0A	324	36.67	a.60.9.1,d.163.1.1	115674,115675
2e62A	61	43.07		
1iazA	179	43.72	b.97.1.1	62131
1j0mA	752	46.13	a.102.3.2,b.24.1.1,b.30.5.2	83910,83911,83912
1gwyA	175	47.99	b.97.1.1	83356
1satA	471	50.39	b.80.7.1,d.92.1.6	28014,40300
1m7xA	617	51.81	b.1.18.2,b.71.1.1,c.1.8.1	78749,78750,78751
1qreA	247	53.01	b.81.1.5	28066
1t07A	94	59.40	d.279.1.1	106196
1jayA	212	66.54	c.2.1.6	66478
2qniA	219	72.39		
1r1hA	696	78.19	d.92.1.4	104756
2cbyA	208	80.25	c.14.1.1	130202
2ebnA	289	81.72	c.1.8.5	28990
2dg7A	195	82.11		
1lmeA	176	83.65	d.167.1.1	84629
1u7eB	154	86.19		
1hkkA	364	90.00	c.1.8.5,d.26.3.1	90634,90635