# List of top-scoring protein chains for t06-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.1935	d.92.1.14,d.166.1.1	123903,123904
2q22A	139	13.17		
1ctjA	89	13.50	a.3.1.1	15798
2izrA	330	18.50		
2g8lA	299	29.62	e.50.1.1	134775
2e62A	61	41.94		
1jhgA	101	42.87	a.4.12.1	19009
1fcyA	236	43.66	a.123.1.1	19282
2gimA	106	44.66	b.6.1.1	135244
1zp2A	235	53.36		
2j7yA	255	59.54	a.123.1.1	138130
1zd3A	555	59.76	c.108.1.2,c.69.1.11	124930,124931
3cjhB	64	71.66		
1cnoA	87	75.37	a.3.1.1	15814
1imjA	210	75.83	c.69.1.23	71246
1s9pA	227	76.81	a.123.1.1	105384
1ctj	89	77.23