# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yqyA	523	0.4792	d.92.1.14,d.166.1.1	123903,123904
2q22A	139	17.99		
1dyoA	160	25.02	b.18.1.7	23771
2g8lA	299	25.45	e.50.1.1	134775
1uhvA	500	25.58	b.71.1.2,c.1.8.3	99402,99403
1rm8A	169	25.81	d.92.1.11	97660
2j7yA	255	53.21	a.123.1.1	138130
2gxaA	274	53.73		
1f8rA	498	56.78	c.3.1.2,d.16.1.5	30410,37974
2o2kA	355	64.48		
1w50A	411	66.43	b.50.1.2	109173
1s9pA	227	67.18	a.123.1.1	105384
1i76A	163	67.57	d.92.1.11	61877
1sacA	204	83.80	b.29.1.5	24237
1eceA	358	88.94	c.1.8.3	28813