Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1yqyA	1.4449e-01	1yqyA/T0489-1yqyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.14 d.166.1.1
1fcyA	8.7928e+00	1fcyA/T0489-1fcyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1nq7A	9.2770e+00	1nq7A/T0489-1nq7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2gpuA	1.1384e+01	2gpuA/T0489-2gpuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1pzlA	1.2360e+01	1pzlA/T0489-1pzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1zgyA	1.3496e+01	1zgyA/T0489-1zgyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1c7kA	1.4277e+01	1c7kA/T0489-1c7kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.1
1n83A	1.4312e+01	1n83A/T0489-1n83A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1t7rA	1.7935e+01	1t7rA/T0489-1t7rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1g2nA	2.0583e+01	1g2nA/T0489-1g2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1kuh	2.2474e+01	1kuh/T0489-1kuh-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q22A	2.3406e+01	2q22A/T0489-2q22A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e62A	2.6323e+01	2e62A/T0489-2e62A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iabA	2.6800e+01	1iabA/T0489-1iabA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.8
1iab	2.6944e+01	1iab/T0489-1iab-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ax9A	2.7726e+01	2ax9A/T0489-2ax9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1hg4A	2.7793e+01	1hg4A/T0489-1hg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1n46A	2.8901e+01	1n46A/T0489-1n46A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1upvA	2.9286e+01	1upvA/T0489-1upvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1pk5A	2.9310e+01	1pk5A/T0489-1pk5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001