Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2e62A	5.5114e+00	2e62A/T0489-2e62A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1otjA	1.6107e+01	1otjA/T0489-1otjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.5
1ayl	1.7441e+01	1ayl/T0489-1ayl-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z69A	2.1251e+01	2z69A/T0489-2z69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u7eB	2.6609e+01	1u7eB/T0489-1u7eB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zybA	3.4152e+01	1zybA/T0489-1zybA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.4 b.82.3.2
2q22A	3.4595e+01	2q22A/T0489-2q22A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2os5A	3.5312e+01	2os5A/T0489-2os5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rl3A	4.0011e+01	1rl3A/T0489-1rl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.3.2 b.82.3.2
1c9fA	4.0445e+01	1c9fA/T0489-1c9fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pqqA	4.0541e+01	2pqqA/T0489-2pqqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bgcA	4.2911e+01	1bgcA/T0489-1bgcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d4bA	4.4165e+01	1d4bA/T0489-1d4bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jayA	4.4205e+01	1jayA/T0489-1jayA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.6
1rgs	5.2197e+01	1rgs/T0489-1rgs-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qniA	5.2529e+01	2qniA/T0489-2qniA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o7fA	5.4873e+01	1o7fA/T0489-1o7fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.31 b.82.3.2 b.82.3.2
1jdc	6.0123e+01	1jdc/T0489-1jdc-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o6eA	6.1924e+01	1o6eA/T0489-1o6eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.57.1.1
1bgeA	6.5441e+01	1bgeA/T0489-1bgeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001