Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2e62A	2.0314e+00	2e62A/T0489-2e62A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q22A	1.2615e+01	2q22A/T0489-2q22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ctjA	2.8501e+01	1ctjA/T0489-1ctjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
1zp2A	3.0238e+01	1zp2A/T0489-1zp2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2os5A	3.4038e+01	2os5A/T0489-2os5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aiuA	4.4429e+01	2aiuA/T0489-2aiuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bc9A	4.8290e+01	3bc9A/T0489-3bc9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cjhB	5.2718e+01	3cjhB/T0489-3cjhB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ct2A	5.3536e+01	3ct2A/T0489-3ct2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ew0A	5.4795e+01	1ew0A/T0489-1ew0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.3.2
1dunA	5.6720e+01	1dunA/T0489-1dunA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1
2acmA	5.7380e+01	2acmA/T0489-2acmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jhgA	6.0406e+01	1jhgA/T0489-1jhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.12.1
1jdcA	6.2491e+01	1jdcA/T0489-1jdcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.71.1.1 c.1.8.1
2f2cA	6.7315e+01	2f2cA/T0489-2f2cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.74.1.1 a.74.1.1
2b9wA	6.7339e+01	2b9wA/T0489-2b9wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ccrA	6.9280e+01	1ccrA/T0489-1ccrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
1ycc	7.0231e+01	1ycc/T0489-1ycc-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ol1A	7.2965e+01	2ol1A/T0489-2ol1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
7taa	7.5005e+01	7taa/T0489-7taa-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001