# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2q22A	139	2.989		
2g8lA	299	10.95	e.50.1.1	134775
2os5A	119	12.16		
3ct2A	382	12.38		
3b64A	112	21.37		
1ew0A	130	27.65	d.110.3.2	40905
2couA	109	31.49		
1so2A	420	32.92	a.211.1.2	98936
3cjhB	64	33.51		
1u7eB	154	35.93		
1f74A	293	36.90	c.1.10.1	29079
1uw0A	117	38.10	g.39.1.12	108063
2guyA	478	38.54	b.71.1.1,c.1.8.1	135754,135755
2hmcA	344	39.79		
1jpdX	324	39.99	c.1.11.2,d.54.1.1	67014,67015
7taa	478	44.69		
2e62A	61	50.89		
2pqqA	149	51.37		
1x1iA	752	51.38	a.102.3.2,b.24.1.1,b.30.5.2	121584,121585,121586
1gefA	123	51.78	c.52.1.18	60465
1t15A	214	52.13	c.15.1.3,c.15.1.3	99067,99068
1z1lA	345	54.16		
2nteA	210	55.90		
1ayl	541	57.38		
2acmA	66	58.47		
1v4pA	157	58.50	d.67.1.2	113533
1e43A	483	60.69	b.71.1.1,c.1.8.1	59217,59218
3bqsA	93	61.32		
1hfoA	113	67.77	d.80.1.3	61006
2i9fA	69	70.92		
1tdzA	272	72.06	a.156.1.2,b.113.1.1,g.39.1.8	106787,106788,106789
1wc1A	226	72.50	d.58.29.1	114492
2d4uA	176	73.40		
1tbfA	347	75.12	a.211.1.2	106743
2b02A	119	76.75		
2cujA	108	78.01	a.4.1.18	130812
1p32A	209	81.33	d.25.1.1	38379
2pgeA	377	84.01		
1uayA	242	86.62	c.2.1.2	88390
2oplA	187	87.21