Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2e62A	6.5729e+00	2e62A/T0489-2e62A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q22A	1.0656e+01	2q22A/T0489-2q22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fcyA	1.3228e+01	1fcyA/T0489-1fcyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1s9pA	1.5682e+01	1s9pA/T0489-1s9pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2gpuA	1.7689e+01	2gpuA/T0489-2gpuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2j7yA	1.9689e+01	2j7yA/T0489-2j7yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1zgyA	2.2334e+01	1zgyA/T0489-1zgyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1nq7A	2.3287e+01	1nq7A/T0489-1nq7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1ie9A	2.4454e+01	1ie9A/T0489-1ie9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1upvA	2.4979e+01	1upvA/T0489-1upvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1n46A	2.6134e+01	1n46A/T0489-1n46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1n83A	2.6390e+01	1n83A/T0489-1n83A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1pzlA	2.6789e+01	1pzlA/T0489-1pzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1t7rA	2.8076e+01	1t7rA/T0489-1t7rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2h79A	2.8593e+01	2h79A/T0489-2h79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qkmA	3.0248e+01	1qkmA/T0489-1qkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1xpcA	3.0638e+01	1xpcA/T0489-1xpcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2p54A	3.2940e+01	2p54A/T0489-2p54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1ymtA	3.5326e+01	1ymtA/T0489-1ymtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g2nA	3.6230e+01	1g2nA/T0489-1g2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001