# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2e62A	61	8.983		
1otjA	283	9.903	b.82.2.5	93517
1ea9C	583	24.49	b.1.18.2,b.71.1.1,c.1.8.1	70087,70088,70089
1kd6A	179	24.53	b.97.1.1	68459
1nu5A	370	27.97	c.1.11.2,d.54.1.1	92183,92184
2os5A	119	27.98		
1gwyA	175	30.62	b.97.1.1	83356
1iazA	179	35.20	b.97.1.1	62131
1g5yA	238	39.25	a.123.1.1	60294
1a28A	256	39.33	a.123.1.1	19290
1sxjC	340	40.83	a.80.1.1,c.37.1.20	106085,106086
1jayA	212	40.92	c.2.1.6	66478
2aaaA	484	42.71	b.71.1.1,c.1.8.1	27777,28764
2q22A	139	45.88		
1m7xA	617	46.90	b.1.18.2,b.71.1.1,c.1.8.1	78749,78750,78751
1bplB	294	49.01	b.71.1.1	27716
2zl4A	196	49.27		
2qniA	219	56.02		
2aaxA	275	58.16		
2aclB	244	58.29		
2guyA	478	58.90	b.71.1.1,c.1.8.1	135754,135755
1s9pA	227	61.80	a.123.1.1	105384
1ie9A	259	62.25	a.123.1.1	62318
2oocA	113	70.62		
2cbyA	208	73.79	c.14.1.1	130202
2pl5A	366	75.14		
1jaeA	471	75.92	b.71.1.1,c.1.8.1	27773,28760
1jdcA	429	82.22	b.71.1.1,c.1.8.1	27789,28776
2r40D	266	85.54		
1u09A	476	85.77	e.8.1.4	107545
1n5nA	180	88.06	d.167.1.1	85336
1lbd	282	89.77