Best Alignments for T0489

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2q22A	6.9315e+00	2q22A/T0489-2q22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j7yA	7.1238e+00	2j7yA/T0489-2j7yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1s9pA	8.1099e+00	1s9pA/T0489-1s9pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2e62A	8.7125e+00	2e62A/T0489-2e62A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fcyA	1.1774e+01	1fcyA/T0489-1fcyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2gpuA	1.6799e+01	2gpuA/T0489-2gpuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1ctjA	1.9412e+01	1ctjA/T0489-1ctjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2h79A	2.0049e+01	2h79A/T0489-2h79A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zgyA	2.7022e+01	1zgyA/T0489-1zgyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1ie9A	2.7499e+01	1ie9A/T0489-1ie9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2v0vA	2.7649e+01	2v0vA/T0489-2v0vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cjhB	2.9726e+01	3cjhB/T0489-3cjhB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cnoA	3.1931e+01	1cnoA/T0489-1cnoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
1n46A	3.3713e+01	1n46A/T0489-1n46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1upvA	3.3803e+01	1upvA/T0489-1upvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
2p54A	3.6771e+01	2p54A/T0489-2p54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2os5A	3.9130e+01	2os5A/T0489-2os5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p1tA	4.0205e+01	2p1tA/T0489-2p1tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pzlA	4.1877e+01	1pzlA/T0489-1pzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1
1qkmA	4.1916e+01	1qkmA/T0489-1qkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.123.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001