# List of top-scoring protein chains for T0489.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1tzqA	175	29.61	b.97.1.1	107522
1iazA	179	29.78	b.97.1.1	62131
1kd6A	179	29.85	b.97.1.1	68459
1t07A	94	43.44	d.279.1.1	106196
1culC	380	57.51	a.66.1.1,c.37.1.8	18204,32087
3b8sA	584	62.03		
1cs4C	394	62.30	a.66.1.1,c.37.1.8	18205,32088
1azsC	402	62.42	a.66.1.1,c.37.1.8	18203,32086
1a28A	256	63.33	a.123.1.1	19290
1e3kA	258	64.12	a.123.1.1	59193
1sr7A	259	64.52	a.123.1.1	105957
1sqnA	261	64.85	a.123.1.1	105944
3b9eA	584	74.89		
1cjtC	402	77.00	a.66.1.1,c.37.1.8	18206,32089
3cjhB	64	79.55		
2oayA	390	80.36		
1gwyA	175	80.57	b.97.1.1	83356