# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2q22A	139	2.695		
1ctjA	89	4.118	a.3.1.1	15798
2e62A	61	6.211		
1s9pA	227	7.618	a.123.1.1	105384
3cjhB	64	10.14		
2j7yA	255	11.34	a.123.1.1	138130
1fcyA	236	11.91	a.123.1.1	19282
1cnoA	87	11.92	a.3.1.1	15814
1a17A	166	22.31	a.118.8.1	19206
1u7eB	154	25.19		
2gpuA	230	25.77	a.123.1.1	135493
1t07A	94	27.05	d.279.1.1	106196
1dunA	134	30.67	b.85.4.1	28371
1n46A	258	36.62	a.123.1.1	85315
2c61A	469	37.57		
1gdvA	85	43.94	a.3.1.1	60458
2h79A	269	47.92		
2os5A	119	50.60		
2ol1A	147	51.33		
1w50A	411	53.61	b.50.1.2	109173
1xpcA	248	56.09	a.123.1.1	115738
2di4A	238	56.87	a.269.1.1	131522
1ctj	89	58.84		
1go3F	107	64.43	a.60.8.2	65407
2g8lA	299	64.53	e.50.1.1	134775
1hn0A	1021	65.95	a.102.3.2,b.18.1.17,b.24.1.1,b.30.5.2	83616,83617,83618,83619
1nnhA	294	65.97	d.104.1.1	92005
2qniA	219	66.81		
3chhA	336	68.88		
2aiuA	105	68.93		
2ebn	289	78.03		
2cpmA	94	78.05		
2v0vA	194	78.22		
2pigA	334	80.43		
1upvA	257	80.90	a.123.1.1	113398
1iazA	179	84.89	b.97.1.1	62131
1zgyA	272	86.43	a.123.1.1	125064
2qvpA	275	89.36