Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1u04A	6.2401e-78	1u04A/T0487-1u04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1 c.55.3.10
1w9hA	1.8474e-47	1w9hA/T0487-1w9hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.10
1si2A	1.4449e-12	1si2A/T0487-1si2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1
1r4kA	2.5023e-08	1r4kA/T0487-1r4kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1
1jx6A	3.3637e-01	1jx6A/T0487-1jx6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2qvwA	1.7027e+00	2qvwA/T0487-2qvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qh9A	2.1715e+00	2qh9A/T0487-2qh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gudA	7.5887e+00	1gudA/T0487-1gudA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2hqbA	1.0831e+01	2hqbA/T0487-2hqbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
8abp	1.3580e+01	8abp/T0487-8abp-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fqxA	1.4138e+01	2fqxA/T0487-2fqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dri	1.5612e+01	2dri/T0487-2dri-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qh8A	1.5928e+01	2qh8A/T0487-2qh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tjyA	2.1737e+01	1tjyA/T0487-1tjyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1jyeA	2.1969e+01	1jyeA/T0487-1jyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1dbqA	2.3100e+01	1dbqA/T0487-1dbqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1z15A	2.5683e+01	1z15A/T0487-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
8abpA	2.5887e+01	8abpA/T0487-8abpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2fvyA	2.6820e+01	2fvyA/T0487-2fvyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2qvcA	2.7124e+01	2qvcA/T0487-2qvcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001