Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1u04A	2.0308e-80	1u04A/T0487-1u04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1 c.55.3.10
1w9hA	2.3739e-48	1w9hA/T0487-1w9hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.10
1si2A	1.5252e-12	1si2A/T0487-1si2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1
2qvwA	1.4154e-02	2qvwA/T0487-2qvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jx6A	7.4016e-02	1jx6A/T0487-1jx6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2qh9A	2.7197e+00	2qh9A/T0487-2qh9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqbA	3.3730e+00	2hqbA/T0487-2hqbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fqxA	4.1962e+00	2fqxA/T0487-2fqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2og2A	5.4779e+00	2og2A/T0487-2og2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rj9A	5.7992e+00	1rj9A/T0487-1rj9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.13.1 c.37.1.10
1zxxA	6.9491e+00	1zxxA/T0487-1zxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qu7A	7.5916e+00	2qu7A/T0487-2qu7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jyeA	7.7075e+00	1jyeA/T0487-1jyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
8abp	7.7241e+00	8abp/T0487-8abp-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qvcA	8.1568e+00	2qvcA/T0487-2qvcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fvyA	8.4915e+00	2fvyA/T0487-2fvyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2qh8A	8.6540e+00	2qh8A/T0487-2qh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qy9A	9.2987e+00	2qy9A/T0487-2qy9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
8abpA	9.8254e+00	8abpA/T0487-8abpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3b9qA	1.0038e+01	3b9qA/T0487-3b9qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001