Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1o59A	6.5000e+01	1o59A/T0487-1o59A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.22 b.18.1.22
2yufA	6.5276e+01	2yufA/T0487-2yufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cqmA	7.1213e+01	1cqmA/T0487-1cqmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.14.1
1b8iB	7.1982e+01	1b8iB/T0487-1b8iB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.1
1jmtB	7.4588e+01	1jmtB/T0487-1jmtB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j5aA	7.5031e+01	2j5aA/T0487-2j5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w78A	9.1550e+01	1w78A/T0487-1w78A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
4eugA	9.2137e+01	4eugA/T0487-4eugA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
2otnA	9.3373e+01	2otnA/T0487-2otnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udhA	9.4465e+01	1udhA/T0487-1udhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
2rldA	9.5063e+01	2rldA/T0487-2rldA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bwuD	9.7091e+01	3bwuD/T0487-3bwuD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1s7jA	1.0121e+02	1s7jA/T0487-1s7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.21.1.2
2if6A	1.0139e+02	2if6A/T0487-2if6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yx1A	1.0415e+02	2yx1A/T0487-2yx1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1esmA	1.0507e+02	1esmA/T0487-1esmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.6
1g8eA	1.0696e+02	1g8eA/T0487-1g8eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zynA	1.0986e+02	1zynA/T0487-1zynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.2 c.47.1.2
1t4oA	1.1048e+02	1t4oA/T0487-1t4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1
1z0kB	1.1050e+02	1z0kB/T0487-1z0kB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.2.19.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001