Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3eugA	2.7244e+01	3eugA/T0487-3eugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
4eugA	2.8478e+01	4eugA/T0487-4eugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
1esmA	3.6504e+01	1esmA/T0487-1esmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.6
1flzA	3.9075e+01	1flzA/T0487-1flzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
1rhoA	6.1800e+01	1rhoA/T0487-1rhoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yufA	6.9200e+01	2yufA/T0487-2yufA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jmtB	6.9292e+01	1jmtB/T0487-1jmtB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udhA	6.9739e+01	1udhA/T0487-1udhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.18.1.1
1wcqA	7.5686e+01	1wcqA/T0487-1wcqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.2 b.18.1.1 b.68.1.1
2rldA	7.8210e+01	2rldA/T0487-2rldA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p2fA	7.9977e+01	1p2fA/T0487-1p2fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.6.1 c.23.1.1
1wvvA	8.1754e+01	1wvvA/T0487-1wvvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b8iB	8.5197e+01	1b8iB/T0487-1b8iB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.1
2euaA	8.6391e+01	2euaA/T0487-2euaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.161.1.1
1jb0D	9.0414e+01	1jb0D/T0487-1jb0D-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bwuD	9.3260e+01	3bwuD/T0487-3bwuD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x58A	9.3599e+01	1x58A/T0487-1x58A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zynA	9.3869e+01	1zynA/T0487-1zynA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.2 c.47.1.2
2hjhA	9.7392e+01	2hjhA/T0487-2hjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hbvA	9.8027e+01	2hbvA/T0487-2hbvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001