# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	15.59	c.18.1.1	31019
1esmA	316	20.53	c.37.1.6	31953
3eugA	229	21.93	c.18.1.1	31018
2pimA	141	25.04		
1flzA	228	29.54	c.18.1.1	31027
1wvvA	265	32.91		
1p2fA	220	38.38	a.4.6.1,c.23.1.1	87720,87721
2chgA	226	43.50		
1wcqA	601	44.01	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
2euaA	431	46.44	d.161.1.1	132380
2bsqE	77	47.86	a.43.1.8	129102
2hjhA	354	48.24		
1udhA	244	57.35	c.18.1.1	31015
1c3qA	272	62.99	c.72.1.2	118436
1jsmB	176	71.43	h.3.1.1	63265
3ce9A	354	72.84		
1zesA	125	74.45	c.23.1.1	124994
2oafA	151	77.69		
2z37A	244	78.60		
2yufA	142	78.79		
1p0kA	349	79.17	c.1.4.1	87648
1kyhA	276	81.09	c.72.1.4	73222
1foeA	377	83.81	a.87.1.1,b.55.1.1	18517,26969
1tuhA	156	84.35	d.17.4.11	107345
1lkoA	191	85.40	a.25.1.1,g.41.5.1	78063,78064