# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	14.85	c.18.1.1	31019
3eugA	229	15.40	c.18.1.1	31018
1esmA	316	20.11	c.37.1.6	31953
1flzA	228	27.39	c.18.1.1	31027
2euaA	431	34.34	d.161.1.1	132380
2pimA	141	34.68		
1p2fA	220	39.56	a.4.6.1,c.23.1.1	87720,87721
1jsmB	176	52.14	h.3.1.1	63265
1wvvA	265	57.77		
2yufA	142	59.62		
1udhA	244	61.57	c.18.1.1	31015
2hjhA	354	64.21		
1wcqA	601	79.13	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
2bsqE	77	81.36	a.43.1.8	129102
1c3qA	272	83.58	c.72.1.2	118436
2frnA	278	87.55	c.66.1.47	133993