# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	18.86	c.18.1.1	31019
3eugA	229	19.57	c.18.1.1	31018
2bsqE	77	29.25	a.43.1.8	129102
1wcqA	601	32.06	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
1wvvA	265	33.74		
1flzA	228	41.27	c.18.1.1	31027
1esmA	316	43.73	c.37.1.6	31953
2chgA	226	47.15		
2pcjA	224	48.11		
2hjhA	354	51.39		
2pimA	141	55.04		
2euaA	431	55.89	d.161.1.1	132380
1b8iB	63	58.80	a.4.1.1	16011
1b3qA	379	61.70	a.30.2.1,b.40.7.1,d.122.1.3	16993,25454,41112
1p2fA	220	64.51	a.4.6.1,c.23.1.1	87720,87721
1jsmB	176	65.61	h.3.1.1	63265
1ryt	190	68.80		
2z37A	244	68.97		
1udhA	244	69.85	c.18.1.1	31015
2hhjA	267	71.52	c.60.1.1	136497
2yufA	142	74.96		
1lkoA	191	75.16	a.25.1.1,g.41.5.1	78063,78064
1j2rA	199	77.29	c.33.1.3	90788
2he7A	283	82.23		
2gz1A	366	84.27	c.2.1.3,d.81.1.1	135887,135888
2jdiA	510	89.97