# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	15.37	c.18.1.1	31019
3eugA	229	16.88	c.18.1.1	31018
1wcqA	601	26.05	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
1wvvA	265	26.50		
2bsqE	77	31.59	a.43.1.8	129102
1esmA	316	35.47	c.37.1.6	31953
2pimA	141	36.32		
2euaA	431	37.32	d.161.1.1	132380
1flzA	228	37.79	c.18.1.1	31027
1p2fA	220	43.64	a.4.6.1,c.23.1.1	87720,87721
1b3qA	379	43.91	a.30.2.1,b.40.7.1,d.122.1.3	16993,25454,41112
2pcjA	224	46.55		
2hjhA	354	49.51		
2hhjA	267	51.39	c.60.1.1	136497
2chgA	226	52.27		
1b8iB	63	55.99	a.4.1.1	16011
1jsmB	176	58.44	h.3.1.1	63265
1udhA	244	58.85	c.18.1.1	31015
2z37A	244	60.10		
2yufA	142	60.54		
2gz1A	366	69.21	c.2.1.3,d.81.1.1	135887,135888
1tuhA	156	69.84	d.17.4.11	107345
2jdiA	510	71.69		
1cnsA	243	74.50	d.2.1.1	36241
1foeA	377	80.99	a.87.1.1,b.55.1.1	18517,26969
1ryt	190	81.64		
1kyhA	276	85.45	c.72.1.4	73222
1lkoA	191	86.68	a.25.1.1,g.41.5.1	78063,78064
2he7A	283	88.43		
1c3qA	272	89.38	c.72.1.2	118436