# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	25.07	c.18.1.1	31019
3eugA	229	29.96	c.18.1.1	31018
1flzA	228	41.14	c.18.1.1	31027
1wcqA	601	43.60	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
2he7A	283	58.92		
2yufA	142	60.46		
2j6pA	152	61.26		
1udhA	244	61.89	c.18.1.1	31015
1f3uA	118	67.15	b.65.1.1	27521
1s3cA	141	70.65		
1p2fA	220	72.70	a.4.6.1,c.23.1.1	87720,87721
1tuhA	156	88.86	d.17.4.11	107345