# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	17.44	c.18.1.1	31019
3eugA	229	18.22	c.18.1.1	31018
1wvvA	265	26.70		
1b3qA	379	31.89	a.30.2.1,b.40.7.1,d.122.1.3	16993,25454,41112
1flzA	228	32.12	c.18.1.1	31027
1wcqA	601	34.33	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
2hjhA	354	38.70		
1wl4A	397	46.93		
1p2fA	220	48.36	a.4.6.1,c.23.1.1	87720,87721
1esmA	316	50.00	c.37.1.6	31953
1udhA	244	50.68	c.18.1.1	31015
2euaA	431	53.45	d.161.1.1	132380
1c3qA	272	53.66	c.72.1.2	118436
1jsmB	176	59.59	h.3.1.1	63265
2j6pA	152	62.86		
2pq6A	482	69.09		
1zesA	125	74.28	c.23.1.1	124994
1thfD	253	75.85	c.1.2.1	28535
1lkoA	191	76.16	a.25.1.1,g.41.5.1	78063,78064
2pimA	141	76.60		
1khvA	516	78.24	e.8.1.4	68627
2frnA	278	79.19	c.66.1.47	133993
2yzrA	330	80.24		
2jdiA	510	81.19		
1kyhA	276	82.61	c.72.1.4	73222
2eenA	183	83.10		
1ryt	190	83.46		
1louA	101	84.27	d.58.14.1	39323
1p0kA	349	84.60	c.1.4.1	87648
2bsqE	77	86.45	a.43.1.8	129102
2irpA	208	87.79		
2jraA	67	89.66