# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
4eugA	229	8.327	c.18.1.1	31019
3eugA	229	8.742	c.18.1.1	31018
1flzA	228	14.34	c.18.1.1	31027
1wcqA	601	19.37	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
1p2fA	220	29.18	a.4.6.1,c.23.1.1	87720,87721
2euaA	431	29.68	d.161.1.1	132380
1udhA	244	30.80	c.18.1.1	31015
1esmA	316	31.12	c.37.1.6	31953
2pimA	141	42.10		
1b3qA	379	43.83	a.30.2.1,b.40.7.1,d.122.1.3	16993,25454,41112
1wvvA	265	45.01		
2pcjA	224	45.99		
1t4oA	117	49.87	d.50.1.1	106425
2yufA	142	59.11		
1cnsA	243	63.93	d.2.1.1	36241
1jsmB	176	70.76	h.3.1.1	63265
2bsqE	77	71.55	a.43.1.8	129102
1no5A	114	82.52	d.218.1.5	92014
1b8iB	63	87.48	a.4.1.1	16011
1yjsA	419	87.63	c.67.1.4	123461