# List of top-scoring protein chains for t2k-w0.5-1-alpha-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3eugA	229	8.779	c.18.1.1	31018
4eugA	229	9.370	c.18.1.1	31019
1flzA	228	12.94	c.18.1.1	31027
1esmA	316	21.81	c.37.1.6	31953
1udhA	244	25.78	c.18.1.1	31015
2euaA	431	27.49	d.161.1.1	132380
1wcqA	601	30.70	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
1wvvA	265	34.52		
2yufA	142	56.50		
2hjhA	354	59.21		
2nsmA	439	65.82		
2bsqE	77	69.47	a.43.1.8	129102
1cnsA	243	74.08	d.2.1.1	36241
1oheA	348	74.89	c.45.1.1,c.45.1.1	87013,87014
2z37A	244	78.76		
1b3qA	379	81.68	a.30.2.1,b.40.7.1,d.122.1.3	16993,25454,41112
1jsmB	176	84.49	h.3.1.1	63265
2pq6A	482	87.08		
2jdiA	510	87.19