# List of top-scoring protein chains for t2k-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1f3uA	118	20.69	b.65.1.1	27521
2yufA	142	37.00		
1p2fA	220	37.44	a.4.6.1,c.23.1.1	87720,87721
1jrmA	104	42.90	d.206.1.1	67136
1flzA	228	45.25	c.18.1.1	31027
1gg3A	279	48.98	a.11.2.1,b.55.1.5,d.15.1.4	16372,27007,37615
3eugA	229	49.73	c.18.1.1	31018
2he7A	283	52.83		
1wcqA	601	55.85	b.1.18.2,b.18.1.1,b.68.1.1	120894,120895,120896
4eugA	229	56.22	c.18.1.1	31019
1s3cA	141	64.10		
2rldA	121	80.04		
1udhA	244	83.23	c.18.1.1	31015
2gscA	128	88.10