Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1o59A	2.4271e+01	1o59A/T0487-1o59A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.22 b.18.1.22
1cqmA	5.2062e+01	1cqmA/T0487-1cqmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.14.1
1s7jA	5.6849e+01	1s7jA/T0487-1s7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.21.1.2
2j5aA	5.9532e+01	2j5aA/T0487-2j5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yx1A	6.0290e+01	2yx1A/T0487-2yx1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b8iB	6.2363e+01	1b8iB/T0487-1b8iB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.1
1w78A	6.3278e+01	1w78A/T0487-1w78A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yufA	6.4606e+01	2yufA/T0487-2yufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pggA	6.9441e+01	2pggA/T0487-2pggA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a22B	7.4671e+01	1a22B/T0487-1a22B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1ecfA	8.2005e+01	1ecfA/T0487-1ecfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.61.1.1 d.153.1.1
1jmtB	8.4100e+01	1jmtB/T0487-1jmtB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ejaA	8.6863e+01	2ejaA/T0487-2ejaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c6qA	8.8195e+01	2c6qA/T0487-2c6qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2iutA	9.3249e+01	2iutA/T0487-2iutA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qhqA	9.9159e+01	1qhqA/T0487-1qhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.1
1zynA	9.9673e+01	1zynA/T0487-1zynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.2 c.47.1.2
2otnA	9.9962e+01	2otnA/T0487-2otnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1odfA	1.0018e+02	1odfA/T0487-1odfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.6
1t4oA	1.0068e+02	1t4oA/T0487-1t4oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.50.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001