# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1o59A	355	8.905	b.18.1.22,b.18.1.22	92495,92496
1s7jA	262	17.00	d.21.1.2	98647
1ecfA	504	20.80	c.61.1.1,d.153.1.1	34053,41820
1w78A	422	24.85		
1a22B	238	32.54	b.1.2.1,b.1.2.1	22003,22004
1b8iB	63	36.58	a.4.1.1	16011
2pggA	774	38.68		
2yx1A	336	41.20		
1cqmA	101	43.74	d.58.14.1	39321
1pufB	73	45.93	a.4.1.1	95132
2j5aA	110	47.26		
2iutA	574	51.24		
1qhqA	140	54.29	b.6.1.1	63326
2hjhA	354	63.92		
2c6qA	351	64.18		
1dxjA	242	64.84	d.2.1.1	36244
1wmhB	86	65.37	d.15.2.2	114745
2ejaA	338	66.83		
2otnA	308	67.30		
2dgkA	452	68.12		
2q5cA	196	69.16		
2yufA	142	69.52		
1lr7A	74	69.76	g.3.11.3,g.68.1.1	84679,84680
2fuqA	747	73.18		
1t4oA	117	74.68	d.50.1.1	106425
2sli	679	83.87		
2daqA	110	86.35	b.34.9.2	131354