# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1o59A	355	11.26	b.18.1.22,b.18.1.22	92495,92496
1w78A	422	24.06		
1ecfA	504	29.60	c.61.1.1,d.153.1.1	34053,41820
1s7jA	262	31.92	d.21.1.2	98647
2j5aA	110	33.94		
2pggA	774	35.32		
1cqmA	101	35.97	d.58.14.1	39321
1b8iB	63	45.74	a.4.1.1	16011
1a22B	238	48.53	b.1.2.1,b.1.2.1	22003,22004
1pufB	73	56.12	a.4.1.1	95132
2yx1A	336	57.08		
2otnA	308	58.43		
2dgkA	452	60.04		
2hjhA	354	60.63		
2iutA	574	64.39		
1qhqA	140	67.12	b.6.1.1	63326
2fuqA	747	70.70		
2ejaA	338	72.65		
1wmhB	86	74.67	d.15.2.2	114745
2yufA	142	76.64		
2c6qA	351	76.76		
1dxjA	242	82.43	d.2.1.1	36244
1pbeA	394	83.49	c.3.1.2,d.16.1.2	30338,37869
2ex4A	241	84.63	c.66.1.42	132516