# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1o59A	355	10.40	b.18.1.22,b.18.1.22	92495,92496
1w78A	422	22.19		
1s7jA	262	27.16	d.21.1.2	98647
2pggA	774	27.49		
1ecfA	504	34.71	c.61.1.1,d.153.1.1	34053,41820
1b8iB	63	38.03	a.4.1.1	16011
2yx1A	336	38.33		
2j5aA	110	45.30		
1pufB	73	45.45	a.4.1.1	95132
1cqmA	101	47.43	d.58.14.1	39321
1a22B	238	50.51	b.1.2.1,b.1.2.1	22003,22004
2otnA	308	50.63		
2iutA	574	51.85		
2yufA	142	56.35		
2hjhA	354	65.05		
2ejaA	338	67.80		
2dgkA	452	70.96		
2q5cA	196	72.30		
1wmhB	86	77.71	d.15.2.2	114745
1dxjA	242	78.80	d.2.1.1	36244
1lr7A	74	85.62	g.3.11.3,g.68.1.1	84679,84680
2c6qA	351	88.81		
1t4oA	117	89.02	d.50.1.1	106425