# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1o59A	355	12.37	b.18.1.22,b.18.1.22	92495,92496
1t4oA	117	16.47	d.50.1.1	106425
1s7jA	262	19.65	d.21.1.2	98647
1w78A	422	20.76		
2iutA	574	31.52		
1a22B	238	35.28	b.1.2.1,b.1.2.1	22003,22004
1b8iB	63	35.82	a.4.1.1	16011
2pggA	774	38.02		
1dxjA	242	38.65	d.2.1.1	36244
1qhqA	140	40.46	b.6.1.1	63326
2yx1A	336	42.18		
1ecfA	504	43.11	c.61.1.1,d.153.1.1	34053,41820
1cqmA	101	46.67	d.58.14.1	39321
2daqA	110	46.76	b.34.9.2	131354
2c6qA	351	48.13		
2q5cA	196	49.37		
2otnA	308	53.49		
2ejaA	338	53.55		
2j5aA	110	54.19		
2yufA	142	54.35		
1pufB	73	60.23	a.4.1.1	95132
2baa	243	72.48		
2okmA	147	72.74		
2dgkA	452	75.69		
1bg1A	722	76.01	a.47.1.1,b.2.5.5,d.93.1.1	17767,22461,40527
2jhqA	226	77.04		
4eugA	229	79.70	c.18.1.1	31019
1wmhB	86	82.52	d.15.2.2	114745
2hhpA	530	87.44	a.160.1.1,d.218.1.3,d.58.16.1	136503,136504,136505
2booA	247	87.90		
3cxmA	268	88.62