# List of top-scoring protein chains for t06-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1o59A	355	4.205	b.18.1.22,b.18.1.22	92495,92496
2yx1A	336	29.06		
2iutA	574	31.03		
1cqmA	101	36.31	d.58.14.1	39321
2daqA	110	41.36	b.34.9.2	131354
2ejaA	338	41.65		
2yufA	142	45.09		
2j5aA	110	46.38		
1jdpA	441	47.46	c.93.1.1	62906
1s7jA	262	49.79	d.21.1.2	98647
2qm1A	326	51.69		
2infA	359	59.17		
1mpgA	282	62.27	a.96.1.3,d.129.1.2	18747,41296
1ylqA	96	77.65	d.218.1.5	123671
1qhqA	140	77.95	b.6.1.1	63326
2rldA	121	80.24		
1qn2A	100	82.57	a.3.1.1	15882
2pggA	774	89.11