Best Alignments for T0487

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1u04A	2.4370e-04	1u04A/T0487-1u04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.14.1 c.55.3.10
1pbeA	3.9287e+01	1pbeA/T0487-1pbeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.3.1.2 d.16.1.2
3cu3A	5.3643e+01	3cu3A/T0487-3cu3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2giaA	6.6386e+01	2giaA/T0487-2giaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.18.1.4
2napA	6.8815e+01	2napA/T0487-2napA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r4iA	6.9297e+01	2r4iA/T0487-2r4iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zjrT	7.0173e+01	2zjrT/T0487-2zjrT-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vzoA	7.0506e+01	1vzoA/T0487-1vzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.144.1.7
2igrA	7.1236e+01	2igrA/T0487-2igrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2chcA	7.7184e+01	2chcA/T0487-2chcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vl0A	7.8976e+01	2vl0A/T0487-2vl0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qa1A	8.0203e+01	2qa1A/T0487-2qa1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e7zA	8.0319e+01	2e7zA/T0487-2e7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jyoA	8.1556e+01	1jyoA/T0487-1jyoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.198.1.1
1v8qA	8.1643e+01	1v8qA/T0487-1v8qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r6vA	8.2259e+01	2r6vA/T0487-2r6vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uw6A	8.3952e+01	1uw6A/T0487-1uw6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h0hA	8.7868e+01	1h0hA/T0487-1h0hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bj0A	8.8461e+01	2bj0A/T0487-2bj0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f8mA	8.8873e+01	2f8mA/T0487-2f8mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001