# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u04A	771	0.008936	b.34.14.1,c.55.3.10	107539,107540
2giaA	195	36.45	d.18.1.4	135221
2j9oA	298	42.46		
2eg4A	230	49.79		
1ygaA	342	52.87		
2exuA	200	55.76		
1vq3A	94	57.17	d.284.1.1	114005
2qckA	167	58.62		
2phzA	311	61.38		
1ifqA	138	63.92	d.110.4.1	62350
3c2bA	221	65.29		
2hjhA	354	65.93		
2a8nA	144	76.20	c.97.1.2	126408
2chuA	296	77.42	c.92.2.4	130485
2awkA	228	84.86		
2iaiA	230	85.62		
1xssA	225	88.10