# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u04A	771	0.01194	b.34.14.1,c.55.3.10	107539,107540
2giaA	195	37.22	d.18.1.4	135221
2qckA	167	39.45		
2j9oA	298	54.82		
2exuA	200	55.33		
2hjhA	354	57.20		
1vq3A	94	59.13	d.284.1.1	114005
2phzA	311	65.00		
2eg4A	230	66.14		
1ygaA	342	66.25		
2chuA	296	70.82	c.92.2.4	130485
2a8nA	144	72.73	c.97.1.2	126408
3c2bA	221	76.68		
1xssA	225	77.79		
1rj8A	164	85.26	b.22.1.1	97547
2iaiA	230	85.58		
1anfA	370	86.15	c.94.1.1	35776
1lwyA	324	87.94	a.96.1.3,d.129.1.2	78285,78286
2awkA	228	89.68