# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u04A	771	0.1177	b.34.14.1,c.55.3.10	107539,107540
1rj8A	164	4.117	b.22.1.1	97547
3cu3A	172	7.584		
2cz2A	223	8.941		
2gsqA	202	17.75	a.45.1.1,c.47.1.5	17715,33009
2f6rA	281	19.06		
2rfrA	155	30.52		
2cvdA	198	30.69	a.45.1.1,c.47.1.5	130861,130862
2qagB	427	30.90		
1v2aA	210	34.17	a.45.1.1,c.47.1.5	100263,100264
1iyhA	198	39.89	a.45.1.1,c.47.1.5	83790,83791
1q0uA	219	43.98	c.37.1.19	95512
1o6zA	303	44.55	c.2.1.5,d.162.1.1	81107,81108
3d9rA	135	50.81		
1eo1A	124	52.26	c.55.5.1	33739
1fw1A	216	53.45	a.45.1.1,c.47.1.5	60051,60052
2pe3A	354	55.97		
1jlvA	209	57.41	a.45.1.1,c.47.1.5	71729,71730
2b78A	385	62.65	b.122.1.9,c.66.1.51	128025,128026
1oe8A	211	63.20	a.45.1.1,c.47.1.5	86905,86906
3cbuA	214	63.60		
1jssA	224	67.53	d.129.3.2	71844
2hnlA	225	68.16		
2anpA	291	74.55	c.56.5.4	127056
1axdA	209	79.59	a.45.1.1,c.47.1.5	17730,33024
2fvgA	340	83.98	b.49.3.1,c.56.5.4	134201,134202
3c9qA	205	85.75		
1o59A	355	85.92	b.18.1.22,b.18.1.22	92495,92496
1i7dA	659	87.91	e.10.1.1	61886