# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1t62A	166	17.27	b.122.1.4	106541
1sr4C	166	31.49	b.42.2.1	105950
3d0kA	304	32.52		
2gqcA	70	33.91		
1xmxA	385	39.54	c.52.1.26	115568
1k6dA	220	45.32	c.124.1.2	72082
1ev7A	317	47.80	c.52.1.9	33315
1an7A	136	49.64	d.140.1.1	41465
1nhp	447	55.91		
3cz6A	168	56.80		
1smpI	101	60.25	b.61.2.1	27417
1e0cA	271	72.70	c.46.1.2,c.46.1.2	32717,32718
1yslA	402	76.56		
2hlkA	255	77.24		
1bouB	302	80.65	c.56.6.1	33859
1ehaA	558	88.95	b.1.18.2,b.71.1.1,c.1.8.1	21859,27786,28773