# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1t62A	166	25.26	b.122.1.4	106541
1an7A	136	26.12	d.140.1.1	41465
1g2oA	268	27.72	c.56.2.1	60228
2adoA	196	30.16		
1qe5A	266	36.13	c.56.2.1	33784
1sskA	158	45.98	b.148.1.1	105986
1k6dA	220	46.14	c.124.1.2	72082
1sr4C	166	53.71	b.42.2.1	105950
2oizA	361	53.94		
1smpI	101	59.96	b.61.2.1	27417
3cz6A	168	63.36		
1xmxA	385	66.51	c.52.1.26	115568
1ev7A	317	74.25	c.52.1.9	33315
1kxlA	199	77.83	b.40.4.3	73155
1hxpA	348	77.95	d.13.1.2,d.13.1.2	37530,37531
1nhp	447	85.75		
2hlkA	255	89.79