# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ju3A	583	15.88	b.18.1.13,c.69.1.21	67300,67301
1smpI	101	21.52	b.61.2.1	27417
2v36A	376	36.63		
2ps5A	374	40.24		
1nuyA	337	41.86	e.7.1.1	86213
2b82A	211	46.75	c.108.1.12	128057
1rmwA	212	47.39		
1nhpA	447	47.69	c.3.1.5,c.3.1.5,d.87.1.1	30549,30550,40196
1jiwI	106	49.51	b.61.2.1	63078
1ekgA	127	54.70	d.82.2.1	40021
1xd5A	112	62.33	b.78.1.1	115155
2ra6A	166	68.76		
2fuvA	549	72.62		
2iekA	200	74.26		
1g38A	393	77.53	c.66.1.27,d.287.1.1	111567,111568
1svmA	377	79.38	c.37.1.20	112126
2ev0A	142	79.67	a.4.5.24,a.76.1.1	132413,132414
2ivwA	113	80.54		
1tyoA	435	83.23		
2idqA	105	83.24		
1m1sA	116	88.68	b.1.11.2	84747
2cstA	411	89.46	c.67.1.1	34273