# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2a2jA	246	13.70	b.45.1.1	126033
2uubT	106	19.71	a.7.6.1	139951
1rmwA	212	20.09		
2giaA	195	20.62	d.18.1.4	135221
1ev7A	317	25.02	c.52.1.9	33315
1m8jA	181	25.99	c.26.1.3	84875
2acaA	189	27.50	d.63.1.2	126545
1ekgA	127	30.39	d.82.2.1	40021
2gcuA	245	33.18		
1fjgT	106	33.87	a.7.6.1	16338
1xmxA	385	34.42	c.52.1.26	115568
2ev0A	142	35.34	a.4.5.24,a.76.1.1	132413,132414
1t62A	166	35.48	b.122.1.4	106541
2bgxA	261	38.13	a.20.1.1,d.118.1.1	128504,128505
1w9aA	147	41.74	b.45.1.1	114408
2orwA	184	42.10		
2eqxA	105	43.68		
2btlA	134	46.81	b.148.1.1	129154
2cdcA	366	49.81		
3prnA	289	50.62	f.4.3.1	43761
1mbyA	88	58.18	d.223.1.1	78931
2qsbA	89	58.72		
1f7dA	136	59.18	b.85.4.1	28353
1ptfA	88	61.50	d.94.1.1	40549
2idqA	105	64.08		
1mg4A	113	64.63	d.15.11.1	84953
1ng2A	193	68.17	b.34.2.1,b.34.2.1	85660,85661
1vqoQ	96	69.12	b.34.5.1	120378
2f9iB	285	69.94		
2bxxA	134	71.86	b.148.1.1	129446
1sfdA	105	72.92	b.6.1.1	105480
1rhsA	296	73.75	c.46.1.2,c.46.1.2	32703,32704
2bbdA	350	76.76		
1idk	359	77.28		
1x0tA	120	80.15		
1oz2A	331	80.67	b.34.9.3,b.34.9.3,b.34.9.3	93781,93782,93783
2fuqA	747	82.79		
1e44B	96	82.94	b.101.1.1	59220
2hw6A	307	85.91		
2j6pA	152	87.59