# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u04A	771	4.31e-14	b.34.14.1,c.55.3.10	107539,107540
1w9hA	427	2.41e-12	c.55.3.10	120785
1uh6A	100	13.02	d.15.1.1	99394
1mf7A	194	13.61	c.62.1.1	84937
1shuX	182	20.16	c.62.1.1	98882
2gm3A	175	20.90	c.26.2.4	135354
1xpkC	388	31.02	c.95.1.2,c.95.1.2	115747,115748
1ido	192	33.37		
2qm0A	275	36.82		
1g0uE	234	47.46	d.153.1.4	41950
2qv6A	268	49.21		
1xpmA	396	49.73	c.95.1.2,c.95.1.2	115759,115760
1rypF	233	51.28	d.153.1.4	41937
1s3rA	535	55.65		
2vliA	183	58.00		
1oneA	436	60.05	c.1.11.1,d.54.1.1	29200,38844
2z08A	137	60.90		
2ccjA	205	65.63		
1r0pA	312	70.76	d.144.1.7	96734
1tvzA	388	71.61	c.95.1.2,c.95.1.2	107367,107368
2qfeA	148	73.45		
1i39A	225	74.09	c.55.3.1	61585
4enl	436	86.05		
1rqlA	267	86.57	c.108.1.3	97750
1oakA	196	87.09	c.62.1.1	34138