# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1oj5A	132	4.554	d.110.3.8	93087
3bzwA	274	9.864		
1y81A	138	13.66	c.2.1.8	122731
2vdwB	287	14.31		
1t9hA	307	17.33	b.40.4.5,c.37.1.8	112358,112359
1w9hA	427	18.41	c.55.3.10	120785
2bdrA	175	20.88	b.82.1.14	128342
2g2cA	167	21.18	c.57.1.1	134535
1y3tA	337	25.44	b.82.1.5	122600
2ywiA	196	39.84		
2ywrA	216	40.32		
2is6A	680	42.42		
1vs5C	233	42.74		
1wzlA	585	46.26	b.1.18.2,b.71.1.1,c.1.8.1	121513,121514,121515
1dkzA	219	49.74	a.8.4.1,b.130.1.1	90345,90346
1krhA	338	51.55	b.43.4.2,c.25.1.2,d.15.4.2	72891,72892,72893
1cxqA	162	54.10	c.55.3.2	33621
2yz0A	138	57.22		
1gxuA	91	57.93	d.58.10.1	76378
2gj8A	172	60.36	c.37.1.8	135270
3bblA	287	61.79		
1hdiA	413	61.83	c.86.1.1	60964
1jkxA	212	61.83	c.65.1.1	66813
2rdxA	379	69.17		
2akoA	251	72.51	c.73.1.3	126923
1u00A	227	72.99	a.8.4.1,b.130.1.1	112900,112901
2pfiA	164	75.66		
2obbA	142	77.84		
1usgA	346	82.80	c.93.1.1	99864
2bw0A	329	83.35	b.46.1.1,c.65.1.1	129303,129304
3c3bA	420	87.01		
1jer	138	87.03		
1th8B	116	87.08	c.13.2.1	106909